Tyrosine-protein kinase Lyn

Site	Peptide	Modification	Experiment
M1	mGCIKSKG	None	rnapeptideintersection_rna
S6	MGCIKsKGKDSLS	Phosphoserine	UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES Phosphosite, September 2009 B UniProtKB KMN UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009
K9	GCIKSKGkDSLSDDG	Ubiquitination	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined January 10, 2014 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014
S11	IKSKGKDsLSDDGVD	Phosphoserine	TCGA PNNL: Ovarian phosphoproteomic data UniProtKB - MOD_RES UniprotKB - MOD_RES Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 limST Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN Phosphosite, September 2009 UniProtKB - MOD_RES UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 PhosphositePlus November 2016 UniprotKB MOD_RES Dec. 16, 2016 LIMSt UniProtKB - MOD_RES Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 DLDsti HPRD: Human Protein Reference Database Curated Modifications
S13	SKGKDSLsDDGVDLK	Phosphoserine	TCGA PNNL: Ovarian phosphoproteomic data UniProtKB - MOD_RES UniprotKB - MOD_RES Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 2016 SWst PhosphoSite Plus Datasets, January 9, 2015 limST Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN Phosphosite, September 2009 UniProtKB - MOD_RES UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 PhosphositePlus November 2016 UniprotKB MOD_RES Dec. 16, 2016 LIMSt UniProtKB - MOD_RES Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 DLDsti Phospho.ELM v9.0
K20	SDDGVDLkTQPVRNT	Ubiquitination	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined January 10, 2014 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014
T30	PVRNTERtIYVRDPT	Phosphothreonine	UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES Phosphosite, September 2009 B UniProtKB KMN UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009
Y32	RNTERTIyVRDPTSN	Phosphotyrosine	bllnk_lyn_30_vd UniProtKB - MOD_RES 60_lyn_blnk Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN 20_lyn_blnk [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer lyn_blnk_20_vd Phosphosite, September 2009 Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniProtKB - MOD_RES PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified UniProtKB - MOD_RES Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 HPRD: Human Protein Reference Database Curated Modifications lyn_blnk_30_vd
Y32	RNTERTIyVRDPTSN	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives test1 clustering_input_without_original_negatives
T37	TIYVRDPtSNKQQRP	Phosphothreonine	UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES Phosphosite, September 2009 B UniProtKB KMN UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009
T58	LPGQRFQtKDPEEQG	Phosphothreonine	PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 2016
K59	PGQRFQTkDPEEQGD	Ubiquitination	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined January 10, 2014
Y74	IVVALYPyDGIHPDD	Phosphotyrosine	Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder
K101	EEHGEWWkAKSLLTK	Ubiquitination	A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles PhosphositePlus November 2016
S104	GEWWKAKsLLTKKEG	Phosphoserine	Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels
S115	KKEGFIPsNYVAKLN	Phosphoserine	PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015
Y117	EGFIPSNyVAKLNTL	Phosphotyrosine	bllnk_lyn_30_vd 60_lyn_blnk PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined December 3, 2012 20_lyn_blnk lyn_blnk_20_vd Phosphosite, September 2009 Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 lyn_blnk_30_vd
Y117	EGFIPSNyVAKLNTL	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives test1 clustering_input_without_original_negatives
T135	EWFFKDItRKDAERQ	Phosphothreonine	PhosphositePlus November 2016 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015
S149	QLLAPGNsAGAFLIR	Phosphoserine	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSitePlus Datasets Combined June 2016
S158	GAFLIREsETLKGSF	Phosphoserine	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSitePlus Datasets Combined June 2016
S164	ESETLKGsFSLSVRD	Phosphoserine	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSitePlus Datasets Combined June 2016
S166	ETLKGSFsLSVRDFD	Phosphoserine	PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016
S187	IKHYKIRsLDNGGYY	Phosphoserine	TCGA PNNL: Ovarian phosphoproteomic data Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels PhosphoSitePlus Datasets Combined June 2016
Y193	RSLDNGGyYISPRIT	Phosphotyrosine	[Samples with poor pre-treatment normalization removed] MEK-Dependent Negative Feedback Underlies BCR-ABL-Mediated Oncogene Addiction bllnk_lyn_30_vd Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines UniProtKB - MOD_RES 60_lyn_blnk Phosphosite, September 2009 March 24 UniprotKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 Tyrosine Phosphorylation of the Lyn Src Homology 2 (SH2) Domain Modulates Its Binding Affinity and Specificity PhosphoSite Plus Datasets, January 9, 2015 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN 20_lyn_blnk lyn_blnk_20_vd Phosphosite, September 2009 UniProtKB - MOD_RES Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 HPRD: Human Protein Reference Database Curated Modifications Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Phosphotyrosines occurring in SH2 domains UniProtKB - MOD_RES PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 Guolin_H4006ER UniprotKB MOD_RES Dec. 16, 2016 [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified UniProtKB - MOD_RES Phosphosite, September 2009 B MEK-Dependent Negative Feedback Underlies BCR-ABL-Mediated Oncogene Addiction PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 Phospho.ELM v9.0 lyn_blnk_30_vd
Y193	RSLDNGGyYISPRIT	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal Tinti All Peptides clustering_input_with_original_negatives clustering_input_without_original_negatives test1 pY in SH2
Y194	SLDNGGYyISPRITF	Phosphotyrosine	[Samples with poor pre-treatment normalization removed] MEK-Dependent Negative Feedback Underlies BCR-ABL-Mediated Oncogene Addiction bllnk_lyn_30_vd Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines UniProtKB - MOD_RES 60_lyn_blnk PhosphoSitePlus Datasets Combined June 2016 Tyrosine Phosphorylation of the Lyn Src Homology 2 (SH2) Domain Modulates Its Binding Affinity and Specificity PhosphoSite Plus Datasets, January 9, 2015 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN 20_lyn_blnk lyn_blnk_20_vd Phosphosite, September 2009 Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 Waziri GBM Samples HPRD: Human Protein Reference Database Curated Modifications Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Phosphotyrosines occurring in SH2 domains UniProtKB - MOD_RES PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 Guolin_H4006ER [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified UniProtKB - MOD_RES Phosphosite, September 2009 B MEK-Dependent Negative Feedback Underlies BCR-ABL-Mediated Oncogene Addiction PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 Phospho.ELM v9.0 lyn_blnk_30_vd
Y194	SLDNGGYyISPRITF	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal Tinti All Peptides clustering_input_with_original_negatives clustering_input_without_original_negatives test1 pY in SH2
S228	RLEKACIsPKPQKPW	Phosphoserine	UniProtKB - MOD_RES UniprotKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN Phosphosite, September 2009 UniProtKB - MOD_RES UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 PhosphositePlus November 2016 UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 HPRD: Human Protein Reference Database Curated Modifications
S246	AWEIPREsIKLVKRL	Phosphoserine	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSitePlus Datasets Combined June 2016 HPRD: Human Protein Reference Database Curated Modifications dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Proteogenomics connects somatic mutations to signalling in breast cancer
Y265	FGEVWMGyYNNSTKV	Phosphotyrosine	bllnk_lyn_30_vd UniProtKB - MOD_RES 60_lyn_blnk Phosphosite, September 2009 March 24 PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN 20_lyn_blnk lyn_blnk_20_vd Phosphosite, September 2009 Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk UniProtKB - MOD_RES UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 UniProtKB - MOD_RES PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 lyn_blnk_30_vd
Y265	FGEVWMGyYNNSTKV	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives test1 clustering_input_without_original_negatives
Y266	GEVWMGYyNNSTKVA	Phosphotyrosine	bllnk_lyn_30_vd 60_lyn_blnk PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined December 3, 2012 20_lyn_blnk Phosphosite, September 2009 Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 lyn_blnk_30_vd PhosphoSite, May 2007 PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 lyn_blnk_20_vd
Y266	GEVWMGYyNNSTKVA	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives test1 clustering_input_without_original_negatives
S269	WMGYYNNsTKVAVKT	Phosphoserine	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSitePlus Datasets Combined June 2016
T276	STKVAVKtLKPGTMS	Phosphothreonine	PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015
T281	VKTLKPGtMSVQAFL	Phosphothreonine	PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015
S283	TLKPGTMsVQAFLEE	Phosphoserine	PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015
T296	EEANLMKtLQHDKLV	Phosphothreonine	PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015
Y306	HDKLVRLyAVVTREE	Phosphotyrosine	bllnk_lyn_30_vd UniProtKB - MOD_RES 60_lyn_blnk UniprotKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN 20_lyn_blnk lyn_blnk_20_vd Phosphosite, September 2009 UniProtKB - MOD_RES Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 HPRD: Human Protein Reference Database Curated Modifications Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniProtKB - MOD_RES PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 UniprotKB MOD_RES Dec. 16, 2016 [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified UniProtKB - MOD_RES Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 Phospho.ELM v9.0 lyn_blnk_30_vd
Y306	HDKLVRLyAVVTREE	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives test1 clustering_input_without_original_negatives
Y316	VTREEPIyIITEYMA	Phosphotyrosine	bllnk_lyn_30_vd Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases [Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES 60_lyn_blnk UniprotKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN 20_lyn_blnk lyn_blnk_20_vd Phosphosite, September 2009 UniProtKB - MOD_RES Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 lyn_blnk_30_vd UniProtKB - MOD_RES PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 UniprotKB MOD_RES Dec. 16, 2016 [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified UniProtKB - MOD_RES Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 HPRD: Human Protein Reference Database Curated Modifications [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks
Y316	VTREEPIyIITEYMA	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives test1 clustering_input_without_original_negatives
T319	EEPIYIItEYMAKGS	Phosphothreonine	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSitePlus Datasets Combined June 2016
Y321	PIYIITEyMAKGSLL	Phosphotyrosine	bllnk_lyn_30_vd 60_lyn_blnk PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined December 3, 2012 20_lyn_blnk Phosphosite, September 2009 Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 lyn_blnk_30_vd PhosphoSite, May 2007 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 lyn_blnk_20_vd
Y321	PIYIITEyMAKGSLL	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives test1 clustering_input_without_original_negatives
S326	TEYMAKGsLLDFLKS	Phosphoserine	PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSitePlus Datasets Combined June 2016
D385	SLMCKIAdFGLARVI	None	dbSNP All mutations All human mutations
Y397	RVIEDNEyTAREGAK	Phosphotyrosine	[Samples with poor pre-treatment normalization removed] MEK-Dependent Negative Feedback Underlies BCR-ABL-Mediated Oncogene Addiction bllnk_lyn_30_vd Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines UniProtKB - MOD_RES 60_lyn_blnk UniprotKB - MOD_RES Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN 20_lyn_blnk [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer lyn_blnk_20_vd Phosphosite, September 2009 UniProtKB - MOD_RES Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 Guolin_H4006ER UniprotKB MOD_RES Dec. 16, 2016 [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified UniProtKB - MOD_RES Phosphosite, September 2009 B MEK-Dependent Negative Feedback Underlies BCR-ABL-Mediated Oncogene Addiction PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 Phospho.ELM v9.0 lyn_blnk_30_vd
Y397	RVIEDNEyTAREGAK	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives test1 clustering_input_without_original_negatives
T398	VIEDNEYtAREGAKF	Phosphothreonine	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined January 10, 2014 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSitePlus Datasets Combined June 2016
K404	YTAREGAkFPIKWTA	Ubiquitination	PhosphositePlus November 2016
T438	ILLYEIVtYGKIPYP	Phosphothreonine	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSitePlus Datasets Combined June 2016
Y439	LLYEIVTyGKIPYPG	Phosphotyrosine	20_lyn_blnk PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 blnk_lyn_40_vd BCR-with-sequences PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 bllnk_lyn_30_vd 60_lyn_blnk PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 test 20_lyn_blnk lyn_blnk_20_vd Celluspot_selected_lyn_blnk_40 PhosphoSitePlus Datasets Combined June 2016 Celluspot_selected_lyn_blnk lyn_blnk_30_vd
Y439	LLYEIVTyGKIPYPG	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives test1 clustering_input_without_original_negatives
T448	KIPYPGRtNADVMTA	Phosphothreonine	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSitePlus Datasets Combined June 2016
Y460	MTALSQGyRMPRVEN	Phosphotyrosine	bllnk_lyn_30_vd UniProtKB - MOD_RES 60_lyn_blnk UniprotKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN 20_lyn_blnk lyn_blnk_20_vd Phosphosite, September 2009 UniProtKB - MOD_RES Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk UniProtKB - MOD_RES UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 UniProtKB - MOD_RES PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 UniprotKB MOD_RES Dec. 16, 2016 [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified UniProtKB - MOD_RES Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 lyn_blnk_30_vd
Y460	MTALSQGyRMPRVEN	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives test1 clustering_input_without_original_negatives
Y473	ENCPDELyDIMKMCW	Phosphotyrosine	bllnk_lyn_30_vd Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines UniProtKB - MOD_RES 60_lyn_blnk UniprotKB - MOD_RES Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN 20_lyn_blnk [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer lyn_blnk_20_vd Phosphosite, September 2009 UniProtKB - MOD_RES Celluspot_selected_lyn_blnk_40 test 20_lyn_blnk UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 HPRD: Human Protein Reference Database Curated Modifications Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniProtKB - MOD_RES PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 UniprotKB MOD_RES Dec. 16, 2016 [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified UniProtKB - MOD_RES Phosphosite, September 2009 B MEK-Dependent Negative Feedback Underlies BCR-ABL-Mediated Oncogene Addiction PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 Phospho.ELM v9.0 lyn_blnk_30_vd
Y473	ENCPDELyDIMKMCW	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives test1 clustering_input_without_original_negatives
K477	DELYDIMkMCWKEKA	Ubiquitination	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSite Plus Datasets Combined July 11, 2014 A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles
T489	EKAEERPtFDYLQSV	Phosphothreonine	UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES Phosphosite, September 2009 B UniProtKB KMN UniProtKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009
Y492	EERPTFDyLQSVLDD	Phosphotyrosine	dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications
Y501	QSVLDDFyTATEGQY	Phosphotyrosine	bllnk_lyn_30_vd Synthesizing Signaling Pathways from Temporal Phosphoproteomic Data 60_lyn_blnk test PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined December 3, 2012 20_lyn_blnk lyn_blnk_20_vd Phosphosite, September 2009 Celluspot_selected_lyn_blnk_40 Flpin_EGFR test 20_lyn_blnk Phosphosite Plus Datasets Combined July 3, 2013 Flpin_EGFR_repB PhosphoSitePlus Datasets Combined June 15, 2015 lyn_blnk_30_vd Flpin_EGFR PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd BCR-with-sequences PhosphositePlus November 2016 [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 HPRD: Human Protein Reference Database Curated Modifications Wolf-Yadlin
Y501	QSVLDDFyTATEGQY	None	clustering_with_original_negatives mcam BCR celluspot bcr_w_clustering clustering_with_negative_removal clustering_input_with_original_negatives rnapeptideintersection_peptides test1 clustering_input_without_original_negatives
T502	SVLDDFYtATEGQYQ	Phosphothreonine	Synthesizing Signaling Pathways from Temporal Phosphoproteomic Data UniProtKB - MOD_RES test PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN Phosphosite, September 2009 Flpin_EGFR UniProtKB - MOD_RES UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 Flpin_EGFR_repB PhosphoSitePlus Datasets Combined June 15, 2015 Flpin_EGFR UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 PhosphositePlus November 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 Wolf-Yadlin
T502	SVLDDFYtATEGQYQ	None	rnapeptideintersection_peptides
T504	LDDFYTAtEGQYQQQ	Phosphothreonine	PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 HPRD: Human Protein Reference Database Curated Modifications dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSitePlus Datasets Combined June 2016
Y508	YTATEGQyQQQP	Phosphotyrosine	bllnk_lyn_30_vd Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases Synthesizing Signaling Pathways from Temporal Phosphoproteomic Data UniProtKB - MOD_RES 60_lyn_blnk UniprotKB - MOD_RES Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels test Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 2016 MCF10A_ETP PhosphoSite Plus Datasets, January 9, 2015 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB KMN 20_lyn_blnk [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer lyn_blnk_20_vd Phosphosite, September 2009 UniProtKB - MOD_RES Celluspot_selected_lyn_blnk_40 Flpin_EGFR test 20_lyn_blnk UniProtKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES Flpin_EGFR_repB PhosphoSitePlus Datasets Combined June 15, 2015 lyn_blnk_30_vd HPRD: Human Protein Reference Database Curated Modifications Flpin_EGFR Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniProtKB - MOD_RES PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Celluspot_selected_lyn_blnk blnk_lyn_40_vd PhosphositePlus November 2016 UniprotKB MOD_RES Dec. 16, 2016 Guolin_H4006ER [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified UniProtKB - MOD_RES Phosphosite, September 2009 B PhosphoSite Plus Datasets Combined January 10, 2014 Celluspot_selected_lyn_blnk_70 Phospho.ELM v9.0 Wolf-Yadlin
Y508	YTATEGQyQQQP	None	clustering_with_original_negatives mcam BCR celluspot clustering_with_negative_removal Tinti All Peptides clustering_input_with_original_negatives rnapeptideintersection_peptides clustering_input_without_original_negatives