Mass spectrometry-based quantification of the cellular response to methyl methanesulfonate treatment in human cells.
PFAM Sites
| Site | Peptides | |
|---|---|---|
| None | 1794 | |
| EF-1_beta_acid | 12 | |
| BLVR | 9 | |
| zf-CCHC_3 | 6 | |
| DUF1086 | 3 | |
| RNA_pol_Rpb1_5 | 2 | |
| Adaptin_N | 2 | |
| FTO_NTD | 2 | |
| BRK | 2 | |
| Ofd1_CTDD | 1 | |
| Gamma-COP | 1 | |
| Mpp10 | 1 | |
| PID | 1 | |
| GBP | 1 | |
| SPT2 | 1 | |
| Brix | 1 | |
| Pkinase | 1 |
PFAM Domains
| Domain | Peptides | |
|---|---|---|
| None | 216 | |
| RRM_1 | 18 | |
| Pkinase | 9 | |
| PHD | 7 | |
| DEAD | 6 | |
| HECT | 5 | |
| Bromodomain | 5 | |
| Myb_DNA-binding | 5 | |
| PWWP | 5 | |
| PH | 5 | |
| Chromo | 5 | |
| Homeobox | 4 | |
| SH3_1 | 4 | |
| SH3_2 | 4 | |
| UQ_con | 4 | |
| C2 | 4 | |
| WW | 4 | |
| La | 4 | |
| HATPase_c | 4 | |
| I-set | 3 | |
| ubiquitin | 3 | |
| UBA | 3 | |
| LNS2 | 3 | |
| RhoGAP | 3 | |
| zf-RING_2 | 3 | |
| HMG_box | 3 | |
| CH | 3 | |
| zf-RanBP | 3 | |
| PDZ | 3 | |
| BRK | 3 | |
| zf-C3HC4_2 | 2 | |
| BAR | 2 | |
| U-box | 2 | |
| XPC-binding | 2 | |
| NTF2 | 2 | |
| CSD | 2 | |
| Myosin_head | 2 | |
| DSPc | 2 | |
| RhoGEF | 2 | |
| CS | 2 | |
| Cyt-b5 | 2 | |
| Sec16_C | 2 | |
| Adaptin_N | 2 | |
| zf-B_box | 2 | |
| Rtt106 | 2 | |
| S1 | 2 | |
| PID | 2 | |
| TRAM_LAG1_CLN8 | 2 | |
| PDEase_I | 2 | |
| GBP | 2 | |
| GBP_C | 2 | |
| Kinesin | 2 | |
| Hist_deacetyl | 2 | |
| uDENN | 2 | |
| dDENN | 2 | |
| RRM_3 | 2 | |
| OSR1_C | 2 | |
| cwf21 | 2 | |
| HATPase_c_3 | 2 | |
| zf-CXXC | 2 | |
| EF1_GNE | 2 | |
| EF-1_beta_acid | 2 | |
| SNF2_N | 2 | |
| DEK_C | 2 | |
| TFIIS_M | 2 | |
| Med26 | 2 | |
| RRM_6 | 2 | |
| RRM_5 | 2 | |
| GYF | 2 | |
| KH_1 | 2 | |
| Ank_4 | 2 | |
| Chromo_shadow | 2 | |
| zf-H2C2_2 | 2 | |
| DNA_gyraseB | 2 | |
| GIT1_C | 2 | |
| ArfGap | 2 | |
| IRF-2BP1_2 | 2 | |
| HSA | 2 | |
| QLQ | 2 | |
| Thioredoxin | 2 | |
| CHDCT2 | 2 | |
| DUF1086 | 2 | |
| CHDNT | 2 | |
| DUF1087 | 2 | |
| COMPASS-Shg1 | 1 | |
| HIRAN | 1 | |
| Ofd1_CTDD | 1 | |
| 2OG-FeII_Oxy_3 | 1 | |
| INCENP_N | 1 | |
| Gamma-COP | 1 | |
| WAC_Acf1_DNA_bd | 1 | |
| Cystatin | 1 | |
| Mpp10 | 1 | |
| DDHD | 1 | |
| XRCC1_N | 1 | |
| Ribosomal_L1 | 1 | |
| Proteasome | 1 | |
| Proteasome_A_N | 1 | |
| Phosducin | 1 | |
| SAM_2 | 1 | |
| OAR | 1 | |
| fn3 | 1 | |
| Titin_Z | 1 | |
| Ig_2 | 1 | |
| UBA_e1_thiolCys | 1 | |
| RNA_pol_Rpb1_5 | 1 | |
| RNA_pol_Rpb1_2 | 1 | |
| RNA_pol_Rpb1_3 | 1 | |
| RNA_pol_Rpb1_4 | 1 | |
| RNA_pol_Rpb1_1 | 1 | |
| RA | 1 | |
| DnaJ | 1 | |
| Cnd1_N | 1 | |
| NUC153 | 1 | |
| Rio2_N | 1 | |
| CHZ | 1 | |
| Sec16 | 1 | |
| CPSase_L_D2 | 1 | |
| CPSase_L_chain | 1 | |
| Biotin_carb_C | 1 | |
| Biotin_lipoyl | 1 | |
| SSrecog | 1 | |
| Tex_N | 1 | |
| HHH_3 | 1 | |
| SHS2_Rpb7-N | 1 | |
| MBD | 1 | |
| DNA_ligase_A_M | 1 | |
| PINIT | 1 | |
| zf-MIZ | 1 | |
| RHD | 1 | |
| Death | 1 | |
| DBC1 | 1 | |
| S1-like | 1 | |
| MIB_HERC2 | 1 | |
| ZZ | 1 | |
| dsDNA_bind | 1 | |
| Lactamase_B_2 | 1 | |
| Lactamase_B_4 | 1 | |
| GATase | 1 | |
| Sp100 | 1 | |
| DUF1898 | 1 | |
| PHR | 1 | |
| Cyclin_N | 1 | |
| Y_phosphatase | 1 | |
| Mre11_DNA_bind | 1 | |
| Metallophos | 1 | |
| Pro_isomerase | 1 | |
| IR1-M | 1 | |
| FOP_dimer | 1 | |
| FTO_NTD | 1 | |
| FTO_CTD | 1 | |
| NOB1_Zn_bind | 1 | |
| ENTH | 1 | |
| PRCC_Cterm | 1 | |
| DCP2 | 1 | |
| NUDIX | 1 | |
| zf-HC5HC2H | 1 | |
| Beta-Casp | 1 | |
| Lactamase_B | 1 | |
| Sec7 | 1 | |
| Sec7_N | 1 | |
| SWIRM | 1 | |
| DUF4208 | 1 | |
| TFIIS_C | 1 | |
| IBN_N | 1 | |
| ABC_tran | 1 | |
| SPOC | 1 | |
| Linker_histone | 1 | |
| BOP1NT | 1 | |
| Spectrin | 1 | |
| BIR | 1 | |
| SPT2 | 1 | |
| PRP3 | 1 | |
| BLVR | 1 | |
| RBB1NT | 1 | |
| ARID | 1 | |
| DMAP_binding | 1 | |
| Pescadillo_N | 1 | |
| zf-CW | 1 | |
| Ferritin | 1 | |
| Ribosomal_S3_C | 1 | |
| KH_2 | 1 | |
| F-box | 1 | |
| BTB | 1 | |
| Aldolase_II | 1 | |
| Peptidase_M24 | 1 | |
| cNMP_binding | 1 | |
| RIIa | 1 | |
| RNase_PH | 1 | |
| RNase_PH_C | 1 | |
| LIM | 1 | |
| Mad3_BUB1_I | 1 | |
| Spt5_N | 1 | |
| KOW | 1 | |
| CTD | 1 | |
| DAZAP2 | 1 | |
| zf-C3H1 | 1 | |
| RPAP3_C | 1 | |
| Brix | 1 | |
| SUI1 | 1 | |
| AAA_5 | 1 | |
| Ank_2 | 1 | |
| UBX | 1 | |
| Thioredoxin_7 | 1 | |
| DUF814 | 1 | |
| MutS_V | 1 | |
| MutS_III | 1 | |
| MutS_I | 1 | |
| MutS_II | 1 | |
| NOGCT | 1 | |
| eIF-1a | 1 | |
| TLD | 1 | |
| LysM | 1 | |
| TPR_11 | 1 | |
| GRIP | 1 | |
| TFIIB | 1 | |
| TF_Zn_Ribbon | 1 | |
| YjeF_N | 1 | |
| LSM14 | 1 | |
| CAP_GLY | 1 | |
| PC4 | 1 | |
| Asx-hm | 1 | |
| PHD_3 | 1 | |
| zf-CCHC_3 | 1 | |
| Acyl_transf_1 | 1 | |
| ketoacyl-synt | 1 | |
| Ketoacyl-synt_C | 1 | |
| PP-binding | 1 | |
| Methyltransf_12 | 1 | |
| GTP_EFTU | 1 | |
| IF-2 | 1 | |
| GTP_EFTU_D2 | 1 | |
| NOSIC | 1 | |
| NOP5NT | 1 | |
| LEM | 1 | |
| GUCT | 1 | |
| TRAUB | 1 | |
| HEAT_2 | 1 | |
| Vac14_Fab1_bd | 1 | |
| HEAT_EZ | 1 | |
| PP28 | 1 | |
| OB_NTP_bind | 1 | |
| HA2 | 1 | |
| zf-SAP30 | 1 | |
| B3_4 | 1 | |
| SRP54_N | 1 | |
| Plus-3 | 1 | |
| HLH | 1 | |
| Myosin_N | 1 | |
| Vps5 | 1 | |
| PX | 1 | |
| DWNN | 1 | |
| Rapamycin_bind | 1 | |
| Helicase_C_2 | 1 | |
| NUC173 | 1 | |
| DZF | 1 | |
| dsrm | 1 | |
| Rad4 | 1 | |
| BHD_3 | 1 | |
| BHD_2 | 1 | |
| BHD_1 | 1 | |
| DKCLD | 1 | |
| AAA_33 | 1 | |
| Telomere_Sde2_2 | 1 | |
| SF3a60_bindingd | 1 | |
| DRY_EERY | 1 | |
| SM-ATX | 1 | |
| LsmAD | 1 | |
| AdoHcyase | 1 | |
| Pkinase_Tyr | 1 | |
| AD | 1 | |
| THUMP | 1 | |
| SRP40_C | 1 | |
| Drf_FH3 | 1 | |
| Drf_GBD | 1 | |
| CBFD_NFYB_HMF | 1 | |
| Nipped-B_C | 1 | |
| Apc4 | 1 | |
| Apc4_WD40 | 1 | |
| Peptidase_M14 | 1 | |
| CarboxypepD_reg | 1 |